Big data toolkit to mine the dark genome for precision medicine

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Gene networks. Credit: J. Auwerx, EPFL
Gene networks. Credit: J. Auwerx, EPFL
EPFL researchers have developed Big Data tools for identifying new gene functions. The work identifies millions of connections between genes and their functions, and can facilitate the development of precision medicine. Genes are the functional units of heredity, and the understanding of gene function is the major focus of biomedical research, serving as the basis of precision medicine. However, most research efforts have been devoted to only a small part of the genes, neglecting the larger "dark genome". This impedes our understanding of the underlying mechanisms of complex traits and diseases, which is necessary for the advancement of precision medicine. "Most of the research are gene-oriented and largely influenced by our prior knowledge, therefore many potentially important genes are ignored," says Johan Auwerx, whose lab at EPFL led the study , along with colleagues from University of Lausanne and University of Tennessee, and EPFL professors Kristina Schoonjans and Stephan Morgenthaler. In an article published in Genome Research , the scientists address the issue of the "dark genome" by developing novel approaches based on systems genetics.
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