Mechanism for DNA invasion of Adenoviral Covid-19 Vaccines Discovered

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Incoming adenovirus particles (AdV) dock at the nuclear pore complexes of a huma

Incoming adenovirus particles (AdV) dock at the nuclear pore complexes of a human cell's nucleus (NPC, dashed line). The cellular enzyme Mind bomb1 (Mib1, grey-white structures) primes them for unlocking and removes protein V (GFP-V, green dots). The uncoated viral DNA genome is then imported into the nucleus. The arrow highlights a virus particle containing both protein V and Mib1, yellow denotes particles containing protein V, and red shows particles lacking V and Mib1. (Image: Michael Bauer/Alfonso Gomez-Gonzalez, UZH)

Adenoviruses have a linchpin protein that stabilizes their DNA until it reaches the infected cell’s nucleus. The protein then detaches from the viral genome, and the virus uncoats. Only then are the genes released into the nucleus, which is necessary for the production of new viruses. This process, discovered by researchers at the University of Zurich, is a key for effective functioning of various Covid-19 vaccines.

Adenoviruses cause respiratory illnesses in humans and have been used as vectors in vaccination for many years, for example against MERS and Ebola virus. Several Covid-19 vaccines are based on replication-defective adenoviruses, including products from AstraZeneca, Johnson & Johnson, CanSino Biologics and Sputnik V. The vaccinated cells produce the SARS-CoV-2 spike protein on their surface, and thereby trigger a protective immune response in the human body.

Viral protein increases stability of virus particle

Researchers are exploiting a key feature of adenoviruses, namely their ability to infect human cells and transfer foreign DNA into the nucleus of these cells. A new study led by Urs Greber, professor at the Department of Molecular Life Sciences at the University of Zurich (UZH) now shows that this process evolved a sophisticated mechanism. "The viral protein V plays a key role. It connects the DNA with the protein coat surrounding the genome. Protein V increases the stability of the virus particle outside the cell, and also in the cytoplasm of the infected cells," explains Greber.

The protein coat prevents the cell from recognizing the invading foreign DNA and activating the alarm systems. Once the virus particle reaches the nuclear pore complex - the gateway into the nucleus - the viral DNA is released into the nucleus, where the genetic information is read by the cell’s machinery, resulting in the relevant proteins being produced. In Covid-19 vaccines, the cells produce the spike protein on the coronavirus’s surface. Presenting the viral protein on the outside of the cell then triggers the immune response in the human body.

Premature release of DNA activates anti-viral alarm systems

The scientists have shown that an adenovirus that is missing the protein V is not only less stable than regular adenoviruses, but also releases its DNA prematurely, before reaching the nuclear pore complex. "This reduces infection and triggers reactions activating the immune system," says Greber. Too much of these reactions triggers inflammation. Notably, both vector-based and mRNA vaccines against coronavirus require just the right amount of these reactions to induce a strong immune response.

In vector-based vaccines the protective protein coat around the DNA enables the particle to reach the nuclear pore complex, where the viral DNA is released. This "uncoating" is absolutely essential for nuclear import, and success in vector-based vaccination, since the nuclear pore complex prevents large virus particles from invading the nucleus. "We were able to demonstrate that the protein V uses the activation by a cellular enzyme named Mind bomb 1, which changes its features and leads to the disruption of the protein coat. The enzyme thereby initiates the nuclear import of the viral DNA genome," says Greber.

Stopping viral infection and improving gene therapy

To demonstrate this key function of Mind bomb1, the researchers used regular adenoviruses to infect human cells that lacked Mind bomb 1, as well as a virus mutant containing protein V, which cannot be modified by this enzyme. In both cases, nuclear import of the viral DNA was defective and the virus particles clustered at the nuclear pore complexes. In other words, the viral infection was stopped.

"Our results inspire the development of anti-viral strategies and enhance procedures to transfer genes into diseased cells for clinical therapy," says Urs Greber. Notably, adenoviruses are employed in a variety of ways - including use as DNA carriers for gene editing in genetic and metabolic diseases as well as cancer.

Literature:

Michael Bauer, Alfonso Gomez-Gonzalez, Maarit Suomalainen, Nicolas Schilling, Silvio Hemmi, Urs F. Greber. A viral ubiquitination switch attenuates innate immunity and triggers nuclear import of virion DNA and infection. Science Advances. December 17, 2021. DOI: 10.1126/sciadv.abl7150


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